Homayoun Valafar: search on Z-Library

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1

Trading pounds for points: Engagement and weight loss in a mobile health intervention

Hales, Sarah, Turner-McGrievy, Gabrielle M, Wilcox, Sara, Davis, Rachel E, Fahim, Arjang, Huhns, Michael, Valafar, Homayoun

Journal:

Year:

2017

Language:

english

File:

PDF, 365 KB

english, 2017

2

[IEEE 2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Atlanta, GA, USA (2011.11.12-2011.11.15)] 2011 IEEE International Conference on Bioinformatics and Biomedicine - An Artificial Neural Network Based Approach for Identification of Native Protein Structures Using an Extended Forcefield

Fawcett, Timothy Matthew, Irausquin, Stephanie, Simin, Mikhail, Valafar, Homayoun

Year:

2011

File:

PDF, 394 KB

2011

3

An artificial neural network approach to improving the correlation between protein energetics and the backbone structure

Fawcett, Timothy M., Irausquin, Stephanie J., Simin, Mikhail, Valafar, Homayoun

Journal:

Year:

2013

Language:

english

File:

PDF, 747 KB

english, 2013

4

Advances in the REDCAT software package

Chris Schmidt,Stephanie J Irausquin,Homayoun Valafar

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 1.12 MB

english, 2013

5

[IEEE 2018 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Saint Louis, MO, USA (2018.5.30-2018.6.2)] 2018 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Application of ensemble learning to the differential gene expression in left-right breast tumors

Cole, Casey A., Nesbitt, Kenneth L., Valafar, Homayoun

Year:

2018

Language:

english

File:

PDF, 277 KB

english, 2018

6

Simultaneous structure and dynamics of a membrane protein using REDCRAFT: Membrane-bound form of Pf1 coat protein

Paul Shealy, Mikhail Simin, Sang Ho Park, Stanley J. Opella, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Year:

2010

Language:

english

File:

PDF, 690 KB

english, 2010

7

[IEEE 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - San Diego, CA, USA (2019.11.18-2019.11.21)] 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Evaluating Precisicon and Recall through the Utility of msTALI via an Active Site Study on Fold Families

McFarland, Devaun, Bullock, Caroline, Valafar, Homayoun

Year:

2019

File:

PDF, 286 KB

2019

8

Designing and executing a functional exercise to test a novel informatics tool for mass casualty triage

Donevant, Sara B, Svendsen, Erik R, Richter, Jane V, Tavakoli, Abbas S, Craig, Jean B r, Boltin, Nicholas D, Valafar, Homayoun, DiNardi, Salvatore Robert, Culley, Joan M

Journal:

Journal of the American Medical Informatics Association

Year:

2019

Language:

english

File:

PDF, 605 KB

english, 2019

9

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Automated Analysis of Femoral Artery Calcification Using Machine Learning Techniques

Zhao, Liang, Odigwe, Brendan, Lessner, Susan, Clair, Daniel, Mussa, Firas, Valafar, Homayoun

Year:

2019

File:

PDF, 409 KB

2019

10

REDCAT: a residual dipolar coupling analysis tool

Homayoun Valafar, James H Prestegard

Journal:

Journal of Magnetic Resonance

Year:

2004

Language:

english

File:

PDF, 1.39 MB

english, 2004

11

[Annual Reports on NMR Spectroscopy] Annual Reports on NMR Spectroscopy Volume 76 Volume 76 || A Review of REDCRAFT

Valafar, Homayoun

Year:

2012

Language:

english

File:

PDF, 1.71 MB

english, 2012

12

DYNAFOLD: A DYNAMIC PROGRAMMING APPROACH TO PROTEIN BACKBONE STRUCTURE DETERMINATION FROM MINIMAL SETS OF RESIDUAL DIPOLAR COUPLINGS

MUKHOPADHYAY, RISHI, IRAUSQUIN, STEPHANIE, SCHMIDT, CHRISTOPHER, VALAFAR, HOMAYOUN

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2014

Language:

english

File:

PDF, 455 KB

english, 2014

13

CCRC-Net: an Internet-based spectral database for complex carbohydrates using artificial neural networks search engines

Faramarz Valafar, Homayoun Valafar

Journal:

TrAC Trends in Analytical Chemistry

Year:

1999

Language:

english

File:

PDF, 448 KB

english, 1999

14

Rapid classification of protein structure models using unassigned backbone RDCs and probability density profile analysis (PDPA)

Sonal Bansal, Xijiang Miao, Michael W.W. Adams, James H. Prestegard, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Year:

2008

Language:

english

File:

PDF, 419 KB

english, 2008

15

Social networks for improving healthy weight loss behaviors for overweight and obese adults: A randomized clinical trial of the social pounds off digitally (Social POD) mobile app

Hales, Sarah, Turner-McGrievy, Gabrielle M., Wilcox, Sara, Fahim, Arjang, Davis, Rachel E., Huhns, Michael, Valafar, Homayoun

Journal:

International Journal of Medical Informatics

Year:

2016

Language:

english

File:

PDF, 806 KB

english, 2016

16

REDCRAFT: A tool for simultaneous characterization of protein backbone structure and motion from RDC data

Michael Bryson, Fang Tian, James H. Prestegard, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Year:

2008

Language:

english

File:

PDF, 625 KB

english, 2008

17

Estimation of relative order tensors, and reconstruction of vectors in space using unassigned RDC data and its application

Xijiang Miao, Rishi Mukhopadhyay, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Year:

2008

Language:

english

File:

PDF, 933 KB

english, 2008

18

Multiple structure alignment with msTALI

Paul Shealy, Homayoun Valafar

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 896 KB

english, 2012

19

TALI: LOCAL ALIGNMENT OF PROTEIN STRUCTURES USING BACKBONE TORSION ANGLES

MIAO, XIJIANG, WADDELL, PETER J., VALAFAR, HOMAYOUN

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2008

Language:

english

File:

PDF, 2.40 MB

english, 2008

20

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - PDBMine: A Reformulation of the Protein Data Bank to Facilitate Structural Data Mining

Cole, Casey, Ott, Christopher, Valdes, Diego, Valafar, Homayoun

Year:

2019

File:

PDF, 489 KB

2019

21

Assessment of protein alignment using 1H–1H residual dipolar coupling measurements

Junfeng Wang, Homayoun Valafar, James H. Prestegard

Journal:

Journal of Magnetic Resonance

Year:

2005

Language:

english

File:

PDF, 386 KB

english, 2005

22

Backbone resonance assignment and order tensor estimation using residual dipolar couplings

Paul Shealy, Yizhou Liu, Mikhail Simin, Homayoun Valafar

Journal:

Journal of Biomolecular NMR

Year:

2011

Language:

english

File:

PDF, 393 KB

english, 2011

23

[IEEE 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - Las Vegas, NV, USA (2019.12.5-2019.12.7)] 2019 International Conference on Computational Science and Computational Intelligence (CSCI) - State Transition Modeling of the Smoking Behavior Using LSTM Recurrent Neural Networks

Odhiambo, Chrisogonas O., Cole, Casey A., Torkjazi, Alaleh, Valafar, Homayoun

Year:

2019

File:

PDF, 535 KB

2019

24

NMR Structural Studies Reveal a Novel Protein Fold for MerB, the Organomercurial Lyase Involved in the Bacterial Mercury Resistance System †,‡

Di Lello, Paola, Benison, Gregory C., Valafar, Homayoun, Pitts, Keith E., Summers, Anne O., Legault, Pascale, Omichinski, James G.

Journal:

Year:

2004

Language:

english

File:

PDF, 523 KB

english, 2004

25

Improvements to REDCRAFT: a software tool for simultaneous characterization of protein backbone structure and dynamics from residual dipolar couplings

Simin, Mikhail, Irausquin, Stephanie, Cole, Casey A., Valafar, Homayoun

Journal:

Journal of Biomolecular NMR

Year:

2014

Language:

english

File:

PDF, 4.47 MB

english, 2014

26

Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings

Cole, Casey Anne, Mukhopadhyay, Rishi, Omar, Hanin, Hennig, Mirko, Valafar, Homayoun

Journal:

Journal of Chemical Theory and Computation

Year:

2016

Language:

english

File:

PDF, 4.55 MB

english, 2016

27

[IEEE 2017 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI) - Orland, FL, USA (2017.2.16-2017.2.19)] 2017 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI) - Resolving ambiguities in accelerometer data due to location of sensor on wrist in application to detection of smoking gesture

Cole, Casey A., Thrasher, James F., Strayer, Scott M., Valafar, Homayoun

Year:

2017

Language:

english

File:

PDF, 1.64 MB

english, 2017

28

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones

Tian, Fang, Valafar, Homayoun, Prestegard, James H.

Journal:

Journal of the American Chemical Society

Year:

2001

Language:

english

File:

PDF, 148 KB

english, 2001

29

Efficient and accurate estimation of relative order tensors from λ-maps

Rishi Mukhopadhyay, Xijiang Miao, Paul Shealy, Homayoun Valafar

Journal:

Journal of Magnetic Resonance

Year:

2009

Language:

english

File:

PDF, 1.65 MB

english, 2009

30

Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patients

Homayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin

Journal:

Artificial Intelligence in Medicine

Year:

2000

Language:

english

File:

PDF, 414 KB

english, 2000

31

Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package

Cole, Casey, Parks, Caleb, Rachele, Julian, Valafar, Homayoun

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 1.49 MB

2020

32

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins

HOMAYOUN VALAFAR, JAMES H. PRESTEGARD, FARAMARZ VALAFAR

Journal:

Annals of the New York Academy of Sciences

Year:

2002

Language:

english

File:

PDF, 1.26 MB

english, 2002

33

Assignment of protein backbone resonances using connectivity, torsion angles and13Cαchemical shifts

Laura C. Morris, Homayoun Valafar, James H. Prestegard

Journal:

Journal of Biomolecular NMR

Year:

2004

Language:

english

File:

PDF, 220 KB

english, 2004

34

Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and λ-Maps

Park, Sang Ho, Son, Woo Sung, Mukhopadhyay, Rishi, Valafar, Homayoun, Opella, Stanley J.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 813 KB

english, 2009

35

Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA

Fahim, Arjang, Mukhopadhyay, Rishi, Yandle, Ryan, Prestegard, James, Valafar, Homayoun

Journal:

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

36

Acute Sleep Deprivation During Pregnancy in Rats: Rapid Elevation of Placental and Fetal Inflammation and Kynurenic Acid

Baratta, Annalisa M., Kanyuch, Nickole R., Cole, Casey A., Valafar, Homayoun, Deslauriers, Jessica, Pocivavsek, Ana

Journal:

Neurobiology of Stress

Year:

2019

File:

PDF, 1.90 MB

2019

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